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Alexey Y. Malyshev

Leading Scientist, D.Sc. in Biology, Prof. of RAS

Laboratory of Cellular Neurobiology of Learning

E-mail: malyshev@ihna.ru

Publication list

Papers

Simonova N.A., Volgushev M.A., Malyshev A.Y. Enhanced Non-Associative Long-Term Potentiation in Immature Granule Cells in the Dentate Gyrus of Adult Rats. Frontiers In Synaptic Neuroscience. 2022. V. 14. P. 889947. DOI: 10.3389/fnsyn.2022.889947
Chasse R., Malyshev A.Y., Fitch R.H., Volgushev M.A. Altered Heterosynaptic Plasticity Impairs Visual Discrimination Learning in Adenosine A1 Receptor Knock-Out Mice. The Journal Of Neuroscience. 2021. V. 41. N. 21. P. 4631-4640. DOI: 10.1523/JNEUROSCI.3073-20.2021
Idzhilova O.S., Roshchin M.V., Smirnova G.R., Malyshev A.Y. Central Targeting of Channelrhodopsin2 by the Motif of Potassium Channel Kv2.1 Can be Altered Due to Overexpression of the Construct. BioNanoScience. 2021. V. 11. N. 2. P. 408-416. DOI: 10.1007/s12668-021-00863-0
Malyshev A.Y., Ostrovsky M.A. Experience in the Use of Optogenetic Approaches to Studies of Brain Functions and Prosthetization of Degenerative Retinas. Neuroscience and Behavioral Physiology. 2020. V. 50. N. 8. P. 1065-1071. DOI: 10.1007/s11055-020-01006-w
Romanova D.Y., Smirnov K.S., Nikitin M.A., Kohn A.B., Borman A.I., Malyshev A.Y., Balaban P.M., Moroz L.L. Sodium action potentials in placozoa: Insights into behavioral integration and evolution of nerveless animals. Biochemical And Biophysical Research Communications. 2020. V. 532. N. 1. P. 120-126. DOI: 10.1016/j.bbrc.2020.08.020
Malyshev A.Y., Balaban P.M. More Light on the Brain: 30 Years Later. Neuroscience and Behavioral Physiology. 2019. V. 49. N. 2. P. 159-162. DOI: 10.1007/s11055-019-00728-w
Smirnova G.R., Roshchin M.V., Vinarskaya A.Kh., Kolotova D.Y., Simonova N.A., Balaban P.M., Malyshev A.Y. Use of Anchoring Motifs to Support the Central and Peripheral Locations of Opsins in Optogenetics. Neuroscience and Behavioral Physiology. 2019. V. 49. N. 9. P. 1089-1091. DOI: 10.1007/s11055-019-00843-8
Doronin D.A., Barykina N.V., Subach O.M., Sotskov V.P., Plusnin V.V., Ivleva O.A., Isaakova E.A., Varizhuk A.M., Pozmogova G.E., Malyshev A.Y., Piatkevich K.D., Anokhin K.V., Enikolopov G.N., Subach F.V. Genetically encoded calcium indicator with NTnC-like design and enhanced fluorescence contrast and kinetics. BMC Biotechnology. 2018. V. 18. N. 1. P. 10. DOI: 10.1186/s12896-018-0417-2
Aseyev N.A., Vinarskaya A.K., Roshchin M., Korshunova T.A., Malyshev A.Y., Zuzina A.B., Ierusalimsky V.N., Lemak M.S., Zakharov I.S., Kolosov P.M., Chesnokova E.A., Volkova S., Kasianov A., Uroshlev L., Popova Y., Boyle R.D., Balaban P.M. Adaptive changes in the vestibular system of land snail to a 30-day spaceflight and readaptation on return to earth. Frontiers in Cellular Neuroscience. 2017. V. 11. P. 348. DOI: 10.3389/fncel.2017.00348
Barykina N.V., Subach O.M., Piatkevich K.D., Jung E.E., Malyshev A.Y., Bogorodskiy A.O., Borshchevskiy V.I., Varizhuk A.M., Pozmogova G.E., Boyden E.S., Anokhin K.V., Enikolopov G.N., Subach F.V. Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi. PLoS ONE. 2017. V. 12. N. 8. e0183757. DOI: 10.1371/journal.pone.0183757
Malyshev A.Y., Roshchin M.V., Smirnova G.R., Dolgikh G.A., Balaban P.M., Ostrovsky M.A. Chloride conducting light activated channel GtACR2 can produce both cessation of firing and generation of action potentials in cortical neurons in response to light. Neuroscience Letter. 2017. V. 640. P. 76-80.
Nikitin E.S., Bal N.V., Malyshev A.Y., Ierusalimsky V.N., Spivak Y.S., Balaban P.M., Volgushev M.A. Encoding of high frequencies improves with maturation of action potential generation in cultured neocortical neurons. Frontiers in Cellular Neuroscience. 2017. V. 11. P. 28. DOI: 10.3389/fncel.2017.00028
Dolgikh D.A., Malyshev A.Y., Roshchin M.V., Smirnova G.R., Nekrasova O.V., Petrovskaya L.E., Feldman T.B., Balaban P.M., Kirpichnikov M.P., Ostrovsky M.A. Comparative characteristics of two anion-channel rhodopsins and prospects of their use in optogenetics. Doklady Biochemistry and Biophysics. 2016. V. 471. N. 1. P. 440-442. DOI: 10.1134/S160767291606017X
Nikitin E.S., Malyshev A.Y., Balaban P.M., Volgushev M.A. Physiological Aspects of the Application of Hodgkin–Huxley Model of Action Potential Initiation for Invertebrate and Vertebrate Neurons. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2016. V. 66. N. 3. P. 279-288. DOI: 10.7868/S0044467716030084
Nikitin E.S., Malyshev A.Y., Balaban P.M., Volgushev M.A. Physiological aspects of the use of the Hodgkin – Huxley action potential generation model for invertebrate and vertebrate animals. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2016. V. 66. N. 3. P. 279-288.
Bal N.V., Malyshev A.Y., Smirnov I., Balaban P.M. Expression of Channelrhodopsin-2 Using in Suspension Electroporation for Studying the Monosynaptic Transmission in Neuronal Culture. BioNanoScience. 2016. V. 6. N. 4. P. 329-331. DOI: 10.1007/s12668-016-0228-7
Balaban P.M., Vinarskaya A.K., Zuzina A.B., Ierusalimsky V.N., Malyshev A.Y. Impairment of the serotonergic neurons underlying reinforcement elicits extinction of the repeatedly reactivated context memory. Scientific Reports. 2016. V. 6. P. 36933. DOI: 10.1038/srep36933
Barykina N.V., Subach O.M., Doronin D.A., Sotskov V.P., Roshchina M.A., Kunitsyna T.A., Malyshev A.Y., Smirnov I.V., Azieva A.M., Sokolov I.S., Piatkevich K.D., Burtsev M.S., Varizhuk A.M., Pozmogova G.E., Anokhin K.V., Subach F.V., Enikolopov G.N. A new design for a green calcium indicator with a smaller size and a reduced number of calcium-binding sites. Scientific Reports. 2016. V. 6. P. 34447. DOI: 10.1038/srep34447
Dolgikh D.A., Malyshev A.Y., Roshchin M.V., Smirnova G.R., Nekrasova O.V., Petrovskaya L.E., Feldman T.B., Balaban P.M., Kirpichnikov M.P., Ostrovsky M.A. Comparative characteristics of two anion-channel rhodopsins and prospects of their use in optogenetics. Doklady Biochemistry and Biophysics. 2016. V. 471. N. 1. P. 440-442. DOI: 10.1134/S160767291606017X
Balaban P.M., Roshchin M., Timoshenko A.K., Zuzina A.B., Lemak M., Ierusalimsky V.N., Aseyev N.A., Malyshev A.Y. Homolog of protein kinase Mζ maintains context aversive memory and underlying long-term facilitation in terrestrial snail Helix. Frontiers in Cellular Neuroscience. 2015. V. 22. N. 9. P. 222. DOI: 10.3389/fncel.2015.00222
Dolgikh D.A., Malyshev A.Y., Salozhin S.V., Nekrasova O.V., Petrovskaya L.E., Roshchin M.V., Borodinova A.A., Feldman T.B., Balaban P.M., Kirpichnikov M.P., Ostrovsky M.A. Anion-selective channelrhodopsin expressed in neuronal cell culture and in vivo in murine brain: Light-induced inhibition of generation of action potentials. Doklady Biochemistry and Biophysics. 2015. V. 465. N. 1. P. 424-427. DOI: 10.1134/S160767291506023X
Malyshev A.Y., Goz R., LoTurco J.J., Volgushev M.A. Advantages and limitations of the use of optogenetic approach in studying fast-scale spike encoding. PLoS ONE. 2015. V. 10. N. 4. e0122286. DOI: 10.1371/journal.pone.0122286
Ilin V., Malyshev A.Y., Wolf F., Volgushev M.A. Fast computations in cortical ensembles require rapid initiation of action potentials. Journal of Neuroscience. 2013. V. 33. N. 6. P. 2281-2292. DOI: 10.1523/JNEUROSCI.0771-12.2013
Malyshev A.Y., Tchumatchenko T., Volgushev S., Volgushev M.A. Energy-efficient encoding by shifting spikes in neocortical neurons. European Journal of Neuroscience. 2013. V. 38. N. 8. P. 3181-3188. DOI: 10.1111/ejn.12338
Malyshev A.Y., Balaban P.M. Changes in intracellular calcium concentration during generation of high-amplitude EPSPs in grape snail neurons. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2012. V. 98. N. 11. P. 1298-1306.
Malyshev A.Y., Balaban P.M. The role of mediator dendro-somatic release in interneuronal communication. Rossijskij Fiziologisheskij Zhurnal im I M Sechenova. 2011. V. 97. N. 10. P. 1084-1091.
Balaban P.M., Malyshev A.Y., Ierusalimsky V.N., Aseyev N.A., Korshunova T.A., Bravarenko N.I., Lemak M.S., Roshchin M., Zakharov I.S., Popova Y., Boyle R. Functional changes in the snail statocyst system elicited by microgravity. PLoS ONE. 2011. V. 6. N. 3. e17710. DOI: 10.1371/journal.pone.0017710
Hoch T., Volgushev S., Malyshev A.Y., Obermayer K., Volgushev M.A. Modulation of the amplitude of γ-band activity by stimulus phase enhances signal encoding. European Journal of Neuroscience. 2011. V. 33. N. 7. P. 1223-1239. DOI: 10.1111/j.1460-9568.2011.07593.x
Malyshev A.Y., Balaban P.M. Serotonergic cerebral cells control activity of cilia in the foregut of the pteropod mollusk Clione limacina. Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology. 2011. V. 197. N. 1. P. 25-32. DOI: 10.1007/s00359-010-0581-x
Tchumatchenko T., Malyshev A.Y., Wolf F., Volgushev M.A. Ultrafast population encoding by cortical neurons. Journal of Neuroscience. 2011. V. 31. N. 34. P. 12171-12179. DOI: 10.1523/JNEUROSCI.2182-11.2011
Tchumatchenko T., Malyshev A.Y., Geisel T., Volgushev M.A., Wolf F. Correlations and synchrony in threshold neuron models. Physical Review Letters. 2010. V. 104. N. 5. P. 058102. DOI: 10.1103/PhysRevLett.104.058102
Malyshev A.Y., Balaban P.M. Buccal neurons activate ciliary beating in the foregut of the pteropod mollusk Clione limacina. Journal of Experimental Biology. 2009. V. 212. N. 18. P. 2969-2976. DOI: 10.1242/jeb.032227
Malyshev A.Y., Norekian T.P., Balaban P.M. Neural control of heartbeat during two antagonistic behaviors: Whole body withdrawal and escape swimming in the Mollusk Clione limacina. Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology. 2008. V. 194. N. 10. P. 899-906. DOI: 10.1007/s00359-008-0362-y
Volgushev M.A., Malyshev A.Y., Balaban P.M., Chistiakova M., Volgushev S., Wolf F. Onset dynamics of action potentials in rat neocortical neurons and identified snail neurons: Quantification of the difference. PLoS ONE. 2008. V. 3. N. 4. e1962. DOI: 10.1371/journal.pone.0001962
Lemak M.S., Bravarenko N.I., Bobrov P.D., Bezuglov V.V., Ierusalimsky V.N., Storozhuk M.V., Malyshev A.Y., Balaban P.M. Cannabinoid regulation in identified synapse of terrestrial snail. European Journal of Neuroscience. 2007. V. 26. N. 11. P. 3207-3214. DOI: 10.1111/j.1460-9568.2007.05945.x
Balaban P.M., Malyshev A.Y., Ierusalimsky V.N., Aseev N.A., Korshunova T.A., Bravarenko N.I., Lemak M.S., Roschin M.V., Zakharov I.S., Popova Y., Boyle R. Structure and function of the snail statocyst system after a 16-day flight on FOTON-M-2. Journal of Gravitational Physiology. 2006. V. 13. N. 1. P. 2101-2104.
Ivanova J.L., Leonova O.G., Popenko V.I., Ierusalimsky V.N., Korshunova T.A., Boguslavsky D.V., Malyshev A.Y., Balaban P.M., Belyavsky A.V. Intracellular localization of the HCS2 gene products in identified snail neurons in vivo and in vitro. Cellular and Molecular Neurobiology. 2006. V. 26. N. 2. P. 127-144. DOI: 10.1007/s10571-006-9025-0
Korshunova T.A., Malyshev A.Y., Zakharov I.S., Ierusalimskii V.N., Balaban P.M. Functions of peptide CNP4, encoded by the HCS2 gene, in the nervous system of Helix lucorum. Neuroscience and Behavioral Physiology. 2006. V. 36. N. 3. P. 253-260. DOI: 10.1007/s11055-006-0007-y
Norekian T.P., Malyshev A.Y. Neural mechanisms underlying co-activation of functionally antagonistic motoneurons during a Clione feeding behavior. Journal of Neurophysiology. 2006. V. 95. N. 4. P. 2560-2569. DOI: 10.1152/jn.01174.2005
Korshunova T.A., Malyshev A.Y., Zakharov I.S., Ierusalimsky V.N., Balaban P.M. Functional role of neuropeptide CNP4 encoded by gene HCS2 in Helix lucorum nervous system. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2005. V. 55. N. 1. P. 91-99.
Bravarenko N.I., Malyshev A.Y., Voronin L.L., Balaban P.M. Ephaptic feedback in identified synapses in mollusk neurons. Neuroscience and Behavioral Physiology. 2005. V. 35. N. 8. P. 781-787. DOI: 10.1007/s11055-005-0124-z
Norekian T.P., Malyshev A.Y. Coordinated excitatory effect of GABAergic interneurons on three feeding motor programs in the mollusk Clione limacina. Journal of Neurophysiology. 2005. V. 93. N. 1. P. 305-315. DOI: 10.1152/jn.00722.2004
Bravarenko N.I., Malyshev A.Y., Voronin L.L., Balaban P.M. Ephaptic feedback in identified synapses of terrestrial snails. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2004. V. 54. N. 4. P. 562-572.
Balaban P.M., Chistiakova M., Malyshev A.Y., Volgushev M.A. Dependence of Calcium Influx in Neocortical Cells on Temporal Structure of Depolarization, Number of Spikes, and Blockade of NMDA Receptors. Journal of Neuroscience Research. 2004. V. 76. N. 4. P. 481-487. DOI: 10.1002/jnr.20104
Boguslavsky D., Ierusalimsky V.N., Malyshev A.Y., Balaban P.M., Belyavsky A. Selective blockade of gene expression in a single identified snail neuron. Neuroscience. 2003. V. 119. N. 1. P. 15-18. DOI: 10.1016/S0306-4522(03)00075-7
Bravarenko N.I., Korshunova T.A., Malyshev A.Y., Balaban P.M. Synaptic contact between mechanosensory neuron and withdrawal interneuron in terrestrial snail is mediated by L-glutamate-like transmitter. Neuroscience Letters. 2003. V. 341. N. 3. P. 237-240. DOI: 10.1016/S0304-3940(03)00213-1
Norekyan T.P., Nikitin E.S., Bravarenko N.I., Malyshev A.Y., Balaban P.M. Phase-dependent coordination of two motor programs in the buccal ganglion of a pteropod mollusk. Neuroscience and behavioral physiology. 2003. V. 33. N. 2. P. 107-111. DOI: 10.1023/A:1021757411343
Malyshev A.Y., Balaban P.M. Identification of mechanoafferent neurons in terrestrial snail: response properties and synaptic connections. J. Neurophysiol.. 2002. V. 87. N. 5. P. 2364-2371. DOI: 10.1152/jn.00185.2001
Malyshev A.Y., Norekian T.P. Phase-locked coordination between two rhythmically active feeding structures in the mollusk Clione limacina. I. Motor neurons. Journal of Neurophysiology. 2002. V. 87. N. 6. P. 2996-3005. DOI: 10.1152/jn.2002.87.6.2996
Norekian T.P., Nikitin E.S., Bravarenko N.I., Malyshev A.Y., Balaban P.M. Phase-dependent coordination of two motor programs in the buccal ganglion of a pteropod mollusk. Zhurnal Vysshei Nervnoi Deiatelnosti im I P Pavlova. 2001. V. 51. N. 6. P. 717-722.